Single-cell mutual information network engineered ranger (scMINER) is a toolbox for single-cell analysis based on mutual information.
NetBID is a data-driven network-based algorithm for Bayesian inference of drivers.
SJARACNe is a scalable tool for gene network reverse engineering from bulk or single-cell gene expression data.
ScreenBEAM is a meta-analysis tool for functional genomic screens via Bayesian hierarchical modeling.